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In
recent years, evidence has emerged for the existence of many
diverse types of RNA, which play roles in a wide range of
biological processes in all kingdoms of life. These
molecules generally do not, however, act in isolation, and
identifying which proteins partner with RNA is a major
challenge. Many methods, in vivo and in vitro, have been
used to address this question, including combinatorial or
high-throughput approaches, such as systematic evolution of
ligands, cross-linking and immunoprecipitation and RNA
immunoprecipitation combined with deep sequencing.
However,
most of these methods are not trivial to pursue and often
require substantial optimization before results can be
achieved. Here, we demonstrate a simple technique that
allows one to screen proteins for RNA-binding properties in
a gel-shift experiment and can be easily implemented in any
laboratory. This assay should be a useful first-pass tool
for assessing whether a protein has RNA- or DNA-binding
properties, prior to committing resources to more complex
procedures.
The principle of RNA EMSA as well as DNA EMSA is simple, considerations for performing a successful RNA EMA including the follows:
1)Needs instruments and reagents for RNA EMSA.
2) The knowledge for handling RNAs and proteins.
3) The skills for running a vertical gel electrophoresis.
4) The facility for imaging ECL signals via x-ray films or imagers for imaging ECL or infrared fluorescence.
5) The RNA probe is expensive, 20 fold of what for making a DNA probes.
6) Most probes for RNA EMSA is a single-strand RNA, which is very fragile for degradation.
7) Working environment should keep as RNase-free.
8) Based on the considerations above, we recommend our IRFluo rEMSA kits for RNA EMSA for its fast results (~2 hours) and simple operation (imaging gels immediately after gel electrophoresis).
9) If using 微奧基因's RNA EMSA service, the results would be secured as the scientists in 微奧基因 Biotech have rich experience for RNA EMSA (Linking to technique services).
通用RNA EMSA Kit
產(chǎn)品名 | 目錄號(hào) | 產(chǎn)品描述 | 產(chǎn)品包裝 | 價(jià)格 |
---|---|---|---|---|
CoolShift-BIr | SIDET102 | 非放射性生物素/ECL RNA EMSA成套試劑,(不帶探針與膜,查看組份與操作說明)。 | 100次 | 2860元 |
CoolShift-IRr | SIDET202 | 非放射性近紅外熒光 RNA EMSA成套試劑(不帶探針,查看組份與操作說明)。 | 100次 | 2860元 |
RNA EMSA探針定制
探針類別
目錄號(hào)
規(guī)格
價(jià)格
探針用途
生物素RNA探針
BPSRV11
200次
IDT RNA合成價(jià)+1450元*
用于RNA EMSA、Competitive(競(jìng)爭(zhēng))與
Supershift (超遷移)EMSA、Pulldown 以及結(jié)合蛋白的純化。
近紅熒光RNA探針
BPSRV21
200次
IDT RNA合成價(jià)+1750元*
用于常規(guī)EMSA、Competitive(競(jìng)爭(zhēng))
EMSA、Supershift (超遷移)EMSA,可以快速完成測(cè)定。
80倍競(jìng)爭(zhēng)RNA探針
CPSRV11
12次
IDT RNA合成價(jià)+20%**
用于Competitive(競(jìng)爭(zhēng))
EMSA,確定核酸與蛋白結(jié)合的特異性。
80倍突變RNA探針
MPSRV21
12次
IDT RNA合成價(jià)+20%**
用于Competitive(競(jìng)爭(zhēng))
EMSA,反證確定核酸與蛋白結(jié)合的特異性。
注:*美國(guó)IDT網(wǎng)站(www.idtdna.com)查詢價(jià)格,1450元/1750元的費(fèi)用包括探針設(shè)計(jì)、生物素標(biāo)記或熒光標(biāo)記、純化、測(cè)定,稅費(fèi)與運(yùn)費(fèi)。**20%附加費(fèi)包括探針設(shè)計(jì)、訂貨、稅費(fèi)與運(yùn)費(fèi)。